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  5. LOC_Os03g48140

LOC_Os03g48140


Description : myosin, putative, expressed


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g48140
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
AC155377.1_FG001 No alias Myosin family protein with Dil domain 0.02 Orthogroups_2024-Update
Bradi1g08710 No alias myosin-like protein XIF 0.03 Orthogroups_2024-Update
Bradi3g29440 No alias myosin 1 0.02 Orthogroups_2024-Update
Brara.F00550.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G113202 No alias myosin 1 0.02 Orthogroups_2024-Update
Glyma.10G286300 No alias myosin 1 0.03 Orthogroups_2024-Update
Glyma.15G266300 No alias myosin-like protein XIF 0.03 Orthogroups_2024-Update
PSME_00001240-RA No alias (at1g08730 : 1499.0) Class XI myosin gene; XIC; CONTAINS... 0.03 Orthogroups_2024-Update
Potri.009G025300 No alias myosin-like protein XIF 0.02 Orthogroups_2024-Update
Potri.011G126800 No alias myosin 2 0.03 Orthogroups_2024-Update
evm.model.tig00000056.26 No alias (at2g20290 : 520.0) member of Myosin-like proteins;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016459 myosin complex IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1379 1483
IPR004009 Myosin_N 42 81
IPR001609 Myosin_head_motor_dom 96 751
IPR000048 IQ_motif_EF-hand-BS 790 809
IPR000048 IQ_motif_EF-hand-BS 863 882
IPR000048 IQ_motif_EF-hand-BS 839 858
IPR000048 IQ_motif_EF-hand-BS 816 834
No external refs found!