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  5. LOC_Os03g49260

LOC_Os03g49260


Description : lipoxygenase, putative, expressed


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g49260
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
170977 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
178158 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
268169 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
A4A49_22832 No alias putative linoleate 9s-lipoxygenase 5 0.04 Orthogroups_2024-Update
Bradi1g72690 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Brara.A02725.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
GRMZM5G822593 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
Glyma.04G105500 No alias lipoxygenase 1 0.05 Orthogroups_2024-Update
Glyma.07G034800 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
MA_138518g0030 No alias (p37831|lox1_soltu : 167.0) Lipoxygenase 1 (EC... 0.02 Orthogroups_2024-Update
MA_161903g0010 No alias (p37831|lox1_soltu : 733.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Seita.9G270500.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.007G210400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Solyc01g006560 No alias Lipoxygenase (AHRD V3.3 *** C0KKU8_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 55 157
IPR013819 LipOase_C 175 844
No external refs found!