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  5. LOC_Os03g50310

LOC_Os03g50310


Description : CCT/B-box zinc finger protein, putative, expressed


Gene families : OG_42_0000843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g50310
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
At1g73870 No alias Zinc finger protein CONSTANS-LIKE 7... 0.03 Orthogroups_2024-Update
Bradi1g11310 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Bradi3g57000 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
Brara.G00872.1 No alias BBX class-III transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G114137 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
Glyma.07G091400 No alias B-box type zinc finger protein with CCT domain 0.04 Orthogroups_2024-Update
Glyma.08G041100 No alias B-box type zinc finger protein with CCT domain 0.04 Orthogroups_2024-Update
Glyma.09G184600 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
MA_470965g0010 No alias (at1g25440 : 100.0) B-box type zinc finger protein with... 0.03 Orthogroups_2024-Update
Pp1s143_52V6 No alias No description available 0.07 Orthogroups_2024-Update
Pp1s32_194V6 No alias F18O22.160; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s35_69V6 No alias F2J7.10; zinc finger (B-box type) family protein... 0.03 Orthogroups_2024-Update
Seita.9G119800.1 No alias BBX class-III transcription factor 0.06 Orthogroups_2024-Update
Sobic.001G118100.1 No alias BBX class-III transcription factor 0.03 Orthogroups_2024-Update
Solyc03g119540 No alias CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN) 0.04 Orthogroups_2024-Update
Sopen02g038060 No alias CCT motif 0.02 Orthogroups_2024-Update
Sopen03g038370 No alias CCT motif 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 338 380
IPR000315 Znf_B-box 17 59
No external refs found!