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  5. LOC_Os03g50970

LOC_Os03g50970


Description : retrotransposon protein, putative, Ty1-copia subclass, expressed


Gene families : OG_42_0000245 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g50970
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
At3g60840 No alias 65-kDa microtubule-associated protein 4... 0.02 Orthogroups_2024-Update
At5g55230 No alias Microtubule-associated proteins 65-1... 0.03 Orthogroups_2024-Update
Pp1s135_55V6 No alias microtubule-associated protein map65-1a 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!