Solyc07g054380


Description : Homeobox-leucine zipper protein family (AHRD V3.3 *-* AT4G37790.1)


Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g054380
Cluster HCCA clusters: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G065900.5 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Potri.006G193700 No alias homeobox from Arabidopsis thaliana 0.03 Orthogroups_2024-Update
Sopen06g020980 No alias HD-ZIP protein N terminus 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 123 155
IPR001356 Homeobox_dom 67 121
No external refs found!