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  5. LOC_Os03g52120

LOC_Os03g52120


Description : DNA binding protein, putative, expressed


Gene families : OG_42_0000408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g52120
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
A4A49_03501 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g10880 No alias Core-2/I-branching... 0.02 Orthogroups_2024-Update
PSME_00055060-RA No alias (at5g11730 : 421.0) Core-2/I-branching... 0.03 Orthogroups_2024-Update
Pp1s30_164V6 No alias T22P22.120; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sopen01g045560 No alias Core-2/I-Branching enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 130 356
No external refs found!