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  5. LOC_Os03g53170

LOC_Os03g53170


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0011668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g53170
Cluster HCCA clusters: cluster_0072


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 427 475
IPR002885 Pentatricopeptide_repeat 327 373
IPR002885 Pentatricopeptide_repeat 193 239
IPR002885 Pentatricopeptide_repeat 270 291
IPR002885 Pentatricopeptide_repeat 298 322
IPR002885 Pentatricopeptide_repeat 167 187
IPR002885 Pentatricopeptide_repeat 503 527
No external refs found!