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  5. LOC_Os03g53200

LOC_Os03g53200


Description : OsCML4 - Calmodulin-related calcium sensor protein, expressed


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g53200
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
83841 No alias calmodulin 4 0.02 Orthogroups_2024-Update
Brara.C03895.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Glyma.14G040600 No alias calmodulin 5 0.02 Orthogroups_2024-Update
LOC_Os03g20370 No alias OsCam1-1 - Calmodulin, expressed 0.03 Orthogroups_2024-Update
MA_52449g0010 No alias (at3g56800 : 266.0) encodes a calmodulin; calmodulin 3... 0.03 Orthogroups_2024-Update
Pp1s79_158V6 No alias calmodulin 0.02 Orthogroups_2024-Update
evm.model.contig_2024.16 No alias (p05434|catr_chlre : 126.0) Caltractin (Centrin) (20 kDa... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 71
IPR002048 EF_hand_dom 82 146
No external refs found!