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  5. LOC_Os03g54000

LOC_Os03g54000


Description : oligopeptide transporter, putative, expressed


Gene families : OG_42_0000467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g54000
Cluster HCCA clusters: cluster_0127

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G233000 No alias oligopeptide transporter 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G009770.2 No alias oligopeptide transporter *(OPT) 0.03 Orthogroups_2024-Update
Kfl00583_0020 kfl00583_0020_v1.1 (at5g64410 : 861.0) oligopeptide transporter;... 0.01 Orthogroups_2024-Update
MA_132413g0010 No alias (at4g16370 : 1173.0) Encodes an oligopeptide transporter... 0.02 Orthogroups_2024-Update
Potri.016G006500 No alias oligopeptide transporter 0.02 Orthogroups_2024-Update
Solyc08g082990 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9RYS3_RICCO) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 49 720
No external refs found!