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  5. LOC_Os03g54010

LOC_Os03g54010


Description : retrotransposon protein, putative, unclassified


Gene families : OG_42_0000438 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g54010
Cluster HCCA clusters: cluster_0070

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G026300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G017260.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G017330.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G035840.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G038050.6 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G038100.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!