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  5. LOC_Os03g54100

LOC_Os03g54100


Description : potassium channel protein, putative, expressed


Gene families : OG_42_0000733 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g54100
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
A4A49_02366 No alias two-pore potassium channel 1 0.05 Orthogroups_2024-Update
AC191379.3_FG002 No alias Outward rectifying potassium channel protein 0.03 Orthogroups_2024-Update
Brara.A02369.1 No alias voltage-gated potassium cation channel *(TPK/KCO) 0.03 Orthogroups_2024-Update
Glyma.19G221000 No alias Ca2+ activated outward rectifying K+ channel 5 0.02 Orthogroups_2024-Update
Sobic.001G086900.1 No alias voltage-gated potassium cation channel *(TPK/KCO) 0.03 Orthogroups_2024-Update
evm.model.contig_2030.12 No alias (at5g55630 : 111.0) Encodes AtTPK1 (KCO1), a member of... 0.01 Orthogroups_2024-Update
evm.model.contig_4404.35 No alias (at4g18160 : 106.0) Encodes AtTPK3 (KCO6), a member of... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013099 K_chnl_dom 72 150
IPR013099 K_chnl_dom 191 264
No external refs found!