Description : ribosomal protein L13, putative, expressed
Gene families : OG_42_0002020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os03g54890 | |
Cluster | HCCA clusters: cluster_0063 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
166650 | No alias | Ribosomal protein L13 family protein | 0.02 | Orthogroups_2024-Update | |
A4A49_14824 | No alias | 60s ribosomal protein l13a-4 | 0.03 | Orthogroups_2024-Update | |
Bradi1g08260 | No alias | Ribosomal protein L13 family protein | 0.04 | Orthogroups_2024-Update | |
Bradi1g59280 | No alias | Ribosomal protein L13 family protein | 0.03 | Orthogroups_2024-Update | |
Brara.F02982.1 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.I01172.1 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Cre12.g532550 | No alias | Ribosomal protein L13 family protein | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G096060.1 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
PSME_00002229-RA | No alias | (at3g24830 : 323.0) Ribosomal protein L13 family... | 0.03 | Orthogroups_2024-Update | |
Potri.002G242600 | No alias | Ribosomal protein L13 family protein | 0.04 | Orthogroups_2024-Update | |
Pp1s165_40V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s174_48V6 | No alias | 60s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s63_162V6 | No alias | 60s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Seita.9G087700.1 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Sobic.001G085400.1 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.009G022400.1 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Solyc05g053670 | No alias | 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
Sopen05g032170 | No alias | Ribosomal protein L13 | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_3478.11 | No alias | (at3g24830 : 235.0) Ribosomal protein L13 family... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
BP | GO:0006897 | endocytosis | IEP | Predicted GO |
BP | GO:0008535 | respiratory chain complex IV assembly | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0009916 | alternative oxidase activity | IEP | Predicted GO |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
BP | GO:0017004 | cytochrome complex assembly | IEP | Predicted GO |
BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
BP | GO:0033108 | mitochondrial respiratory chain complex assembly | IEP | Predicted GO |
BP | GO:0033617 | mitochondrial respiratory chain complex IV assembly | IEP | Predicted GO |
BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
BP | GO:0098657 | import into cell | IEP | Predicted GO |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005822 | Ribosomal_L13 | 12 | 119 |
No external refs found! |