LOC_Os03g55610

Description : dof zinc finger domain containing protein, putative, expressed

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g55610
Cluster	HCCA clusters: cluster_0095

Target	Alias	Description	ECC score	Gene Family Method
At1g47655	No alias	Dof zinc finger protein DOF1.6...	0.02	Orthogroups_2024-Update
At5g65590	No alias	SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]	0.02	Orthogroups_2024-Update
Glyma.11G059300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G352000	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
HORVU3Hr1G116260.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Solyc02g076850	No alias	Dof zinc finger protein4	0.03	Orthogroups_2024-Update
Solyc06g005130	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA)	0.03	Orthogroups_2024-Update
Solyc08g082910	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA)	0.04	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006270	DNA replication initiation	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	78	132

External Links

No external refs found!

LOC_Os03g55610

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation