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  5. LOC_Os03g55760

LOC_Os03g55760


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g55760
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
At5g06800 No alias myb-like HTH transcriptional regulator family protein... 0.04 Orthogroups_2024-Update
Brara.A02598.1 No alias transcription factor *(PHR1) & GARP subgroup PHL... 0.02 Orthogroups_2024-Update
Brara.B00662.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B03010.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Brara.C00731.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E01728.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H01468.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
HORVU2Hr1G095530.2 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
LOC_Os03g21240 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10433112g0010 No alias (at2g01060 : 160.0) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
Potri.008G081800 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G121800 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Pp1s112_141V6 No alias transfactor-like protein 0.03 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G106300.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Solyc09g005370 No alias MYB transcription factor (AHRD V3.3 *-* K9JGB9_SOYBN) 0.02 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g026970 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 122 173
No external refs found!