1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g55830

LOC_Os03g55830


Description : BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g55830
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
At2g23050 No alias BTB/POZ domain-containing protein NPY4... 0.03 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.02 Orthogroups_2024-Update
At4g37590 No alias BTB/POZ domain-containing protein NPY5... 0.03 Orthogroups_2024-Update
Bradi1g13890 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi2g61714 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Brara.I05548.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.02 Orthogroups_2024-Update
GRMZM2G172506 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.06G061400 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G320400 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G073650.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
PSME_00001436-RA No alias (at1g03010 : 601.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Potri.007G053200 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Sobic.001G077200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g048130 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902562 H4 histone acetyltransferase complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 259 530
IPR000210 BTB/POZ_dom 46 162
No external refs found!