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Description : RING-H2 finger protein ATL5D, putative, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g57410 | |
| Cluster | HCCA clusters: cluster_0057 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g20823 | No alias | RING-H2 finger protein ATL80... | 0.02 | Orthogroups_2024-Update | |
| At3g05200 | No alias | E3 ubiquitin-protein ligase ATL6... | 0.02 | Orthogroups_2024-Update | |
| Brara.C03353.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.D02177.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Brara.H00836.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.H00897.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Brara.H01648.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I00473.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I02588.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G021796 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G386584 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G242800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G047300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.14G177900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G016510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G015780.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G009820.3 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G077610.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G036380.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| MA_77628g0010 | No alias | (at1g72310 : 116.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
| MA_94359g0010 | No alias | (at4g35480 : 121.0) Encodes a putative RING-H2 finger... | 0.02 | Orthogroups_2024-Update | |
| PSME_00057213-RA | No alias | (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
| Potri.007G111900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.008G019000 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.016G067900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.017G049300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s100_96V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Pp1s102_105V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Pp1s185_137V6 | No alias | zinc finger | 0.03 | Orthogroups_2024-Update | |
| Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G302400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G147301.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G005000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G163500.3 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G030200.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc06g064440 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 *-*... | 0.02 | Orthogroups_2024-Update | |
| Solyc09g075320 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen12g029900 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00001128.32 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006415 | translational termination | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0070070 | proton-transporting V-type ATPase complex assembly | IEP | Predicted GO |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Predicted GO |
| BP | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 141 | 184 |
| No external refs found! |