Description : XRN 5'-3' exonuclease N-terminus domain containing protein, expressed
Gene families : OG_42_0000619 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os03g58060 | |
Cluster | HCCA clusters: cluster_0107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_07030 | No alias | 5'-3' exoribonuclease 3 | 0.02 | Orthogroups_2024-Update | |
MA_10430844g0010 | No alias | (at1g75660 : 1107.0) Encodes a protein with similarity... | 0.04 | Orthogroups_2024-Update | |
PSME_00003771-RA | No alias | (at1g75660 : 288.0) Encodes a protein with similarity to... | 0.02 | Orthogroups_2024-Update | |
Sobic.001G058700.1 | No alias | exoribonuclease *(XRN4) | 0.02 | Orthogroups_2024-Update | |
Sopen04g018450 | No alias | XRN 5'-3' exonuclease N-terminus | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_4415.6 | No alias | (at1g75660 : 446.0) Encodes a protein with similarity to... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0004527 | exonuclease activity | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
BP | GO:0006811 | ion transport | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predicted GO |
CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
No external refs found! |