Description : retrotransposon protein, putative, Ty3-gypsy subclass, expressed
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os03g58470 | |
Cluster | HCCA clusters: cluster_0116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.D01833.1 | No alias | linker histone *(H1) | 0.02 | Orthogroups_2024-Update | |
GRMZM2G121221 | No alias | winged-helix DNA-binding transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.10G033100 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
MA_196776g0010 | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
MA_500183g0010 | No alias | (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
MA_5243726g0010 | No alias | (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... | 0.02 | Orthogroups_2024-Update | |
MA_6409g0010 | No alias | (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
MA_9984190g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
Mp6g03150.1 | No alias | linker histone (H1) | 0.02 | Orthogroups_2024-Update | |
Pp1s27_179V6 | No alias | histone-like protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006334 | nucleosome assembly | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015689 | molybdate ion transport | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 54 | 121 |
No external refs found! |