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  5. LOC_Os03g58830

LOC_Os03g58830


Description : BEE 1, putative, expressed


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g58830
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
A4A49_07602 No alias transcription factor bhlh62 0.02 Orthogroups_2024-Update
At5g48560 No alias Transcription factor bHLH78... 0.03 Orthogroups_2024-Update
Bradi3g41510 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G144275 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G025400 No alias BIG PETAL P 0.02 Orthogroups_2024-Update
Glyma.02G125200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G039390.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G037690.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00020009-RA No alias (at1g68920 : 136.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Sobic.001G105000.1 No alias regulatory protein (CIB) of blue light perception &... 0.01 Orthogroups_2024-Update
Sopen04g001150 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g028890 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 146 193
No external refs found!