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  5. LOC_Os03g59440

LOC_Os03g59440


Description : dirigent, putative, expressed


Gene families : OG_42_0000072 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g59440
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
Bradi3g08860 No alias Disease resistance-responsive (dirigent-like protein)... 0.04 Orthogroups_2024-Update
Glyma.03G044300 No alias Disease resistance-responsive (dirigent-like protein)... 0.03 Orthogroups_2024-Update
Glyma.03G147700 No alias Disease resistance-responsive (dirigent-like protein)... 0.02 Orthogroups_2024-Update
LOC_Os11g07770 No alias dirigent, putative, expressed 0.03 Orthogroups_2024-Update
MA_10236378g0010 No alias (at1g65870 : 119.0) Disease resistance-responsive... 0.02 Orthogroups_2024-Update
Sobic.005G061200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G122800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G256900.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR004265 Dirigent 37 183
No external refs found!