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Description : expressed protein
Gene families : OG_42_0001943 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001943_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g60170 | |
| Cluster | HCCA clusters: cluster_0129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At5g18510 | No alias | Aminotransferase-like, plant mobile domain family... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g59641 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Brara.E00889.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F00281.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.H00839.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G451506 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g15450 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
| Potri.001G421900 | No alias | Plant mobile domain protein family | 0.03 | Orthogroups_2024-Update | |
| Sopen07g032520 | No alias | Plant mobile domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
| MF | GO:0004146 | dihydrofolate reductase activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0006415 | translational termination | IEP | Predicted GO |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Predicted GO |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Predicted GO |
| BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Predicted GO |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |