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  5. LOC_Os03g60540

LOC_Os03g60540


Description : ZOS3-20 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g60540
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
At5g59820 No alias Zinc finger protein ZAT12... 0.03 Orthogroups_2024-Update
LOC_Os03g60560 No alias ZOS3-21 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
Sobic.005G025100.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G164600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g008440 No alias Zinc finger family protein (AHRD V3.3 *** B9N876_POPTR) 0.02 Orthogroups_2024-Update
Sopen11g026150 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!