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Description : retrotransposon protein, putative, unclassified, expressed
Gene families : OG_42_0004902 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004902_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g63470 | |
| Cluster | HCCA clusters: cluster_0034 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| HORVU5Hr1G122810.7 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Solyc12g042200 | No alias | Transducin/WD40 repeat protein (AHRD V3.3 *** G7J399_MEDTR) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predicted GO |
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Predicted GO |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Predicted GO |
| MF | GO:0008987 | quinolinate synthetase A activity | IEP | Predicted GO |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Predicted GO |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| BP | GO:0019674 | NAD metabolic process | IEP | Predicted GO |
| MF | GO:0019825 | oxygen binding | IEP | Predicted GO |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
| MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |