1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g01490

LOC_Os04g01490


Description : zinc finger, C3HC4 type, domain containing protein, expressed


Gene families : OG_42_0001073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g01490
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G064600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Kfl00009_0590 kfl00009_0590_v1.1 (at5g60580 : 132.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Pp1s24_209V6 No alias protein binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 251 298
No external refs found!