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  5. Solyc07g055780

Solyc07g055780


Description : Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)


Gene families : OG_42_0000861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g055780
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G026200 No alias TRICHOME BIREFRINGENCE-LIKE 43 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 85 346
IPR025846 PMR5_N_dom 32 84
No external refs found!