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  5. Solyc07g056030

Solyc07g056030


Description : Nuclear-interacting partner of ALK (AHRD V3.3 *** W9QKR2_9ROSA)


Gene families : OG_42_0001622 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g056030
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Bradi2g42980 No alias C3HC zinc finger-like 0.03 Orthogroups_2024-Update
Glyma.15G253100 No alias IAP-like protein 1 0.03 Orthogroups_2024-Update
Kfl00058_0070 kfl00058_0070_v1.1 (at1g48950 : 195.0) C3HC zinc finger-like ; FUNCTIONS... 0.02 Orthogroups_2024-Update
evm.model.tig00021036.53 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00021257.10 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR012935 Znf_C3HC-like 90 214
No external refs found!