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  5. Solyc07g056300

Solyc07g056300


Description : AT hook motif DNA-binding family protein (AHRD V3.3 *** G7K3C4_MEDTR)


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g056300
Cluster HCCA clusters: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
At2g42940 No alias AT-hook motif nuclear-localized protein... 0.03 Orthogroups_2024-Update
Brara.D02740.1 No alias AHL clade-A transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G198800 No alias Predicted AT-hook DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.05G111500 No alias Predicted AT-hook DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.11G221200 No alias AT-hook protein of GA feedback 2 0.04 Orthogroups_2024-Update
LOC_Os06g04540 No alias DNA binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Solyc01g080960 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g082810 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g089620 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 71 183
No external refs found!