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  5. Solyc07g056540

Solyc07g056540


Description : glycolate oxidase X92888


Gene families : OG_42_0000812 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g056540
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
266585 No alias Aldolase-type TIM barrel family protein 0.06 Orthogroups_2024-Update
A4A49_39817 No alias peroxisomal (s)-2-hydroxy-acid oxidase 0.04 Orthogroups_2024-Update
At3g14415 No alias GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55] 0.04 Orthogroups_2024-Update
Brara.C03525.1 No alias glycolate oxidase & EC_1.1 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Brara.E02680.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.08G175800 No alias Aldolase-type TIM barrel family protein 0.07 Orthogroups_2024-Update
Glyma.15G250800 No alias Aldolase-type TIM barrel family protein 0.06 Orthogroups_2024-Update
HORVU2Hr1G103180.4 No alias glycolate oxidase & EC_1.1 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
MA_15820g0010 No alias (at3g14420 : 608.0) Aldolase-type TIM barrel family... 0.04 Orthogroups_2024-Update
PSME_00030831-RA No alias (at3g14420 : 600.0) Aldolase-type TIM barrel family... 0.03 Orthogroups_2024-Update
Potri.011G112700 No alias Aldolase-type TIM barrel family protein 0.04 Orthogroups_2024-Update
Pp1s102_189V6 No alias peroxisomal glycolate oxidase 0.02 Orthogroups_2024-Update
Pp1s109_241V6 No alias peroxisomal glycolate oxidase 0.12 Orthogroups_2024-Update
Sobic.001G065600.1 No alias glycolate oxidase & EC_1.1 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Sobic.002G036000.4 No alias glycolate oxidase & EC_1.1 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sopen07g029900 No alias FMN-dependent dehydrogenase 0.1 Orthogroups_2024-Update
evm.model.contig_2031.20 No alias (at3g14415 : 415.0) Aldolase-type TIM barrel family... 0.04 Orthogroups_2024-Update
evm.model.tig00021569.2 No alias (at3g14420 : 298.0) Aldolase-type TIM barrel family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000262 FMN-dep_DH 14 356
No external refs found!