LOC_Os04g11730

Description : methyl-CpG binding domain containing protein, expressed

Gene families : OG_42_0004300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004300_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g11730
Cluster	HCCA clusters: cluster_0002

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint	IEP	Predicted GO
BP	GO:0000077	DNA damage checkpoint	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
BP	GO:0031570	DNA integrity checkpoint	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0045786	negative regulation of cell cycle	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	71	120
IPR022256	DUF3778	328	378

External Links

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