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  5. LOC_Os04g13430

LOC_Os04g13430


Description : expressed protein


Gene families : OG_42_0000180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g13430
Cluster HCCA clusters: cluster_0125

Target Alias Description ECC score Gene Family Method Actions
Bradi3g34611 No alias Ribonuclease H-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g45424 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi4g05095 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os01g57170 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os03g62000 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 305 405
IPR026960 RVT-Znf 116 211
No external refs found!