1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g15530

LOC_Os04g15530


Description : retrotransposon protein, putative, Ty1-copia subclass, expressed


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g15530
Cluster HCCA clusters: cluster_0060

Target Alias Description ECC score Gene Family Method Actions
A4A49_26079 No alias putative lrr receptor-like serinethreonine-protein kinase 0.02 Orthogroups_2024-Update
Glyma.01G152200 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G022450.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G044140.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
MA_10427338g0010 No alias (at5g41180 : 90.5) leucine-rich repeat transmembrane... 0.02 Orthogroups_2024-Update
MA_161530g0010 No alias (at1g34110 : 215.0) Leucine-rich receptor-like protein... 0.02 Orthogroups_2024-Update
MA_178134g0030 No alias (at5g20480 : 249.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
MA_38414g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_63760g0010 No alias (at5g20480 : 158.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
MA_738611g0010 No alias (at1g25320 : 101.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
MA_93312g0010 No alias (at3g47570 : 161.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
Mp3g14080.1 No alias Probable leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
PSME_00021673-RA No alias (at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative... 0.02 Orthogroups_2024-Update
PSME_00025387-RA No alias (at4g36180 : 190.0) Leucine-rich receptor-like protein... 0.02 Orthogroups_2024-Update
PSME_00044948-RA No alias (at3g47110 : 644.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
PSME_00048257-RA No alias (at3g47570 : 560.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00051160-RA No alias (at5g20480 : 127.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
Potri.011G140900 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Seita.1G041400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.4G046400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.5G105200.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.5G105900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.5G106400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.001G064700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.002G075000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G068200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.005G205300.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.008G065200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Solyc04g012190 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc06g076910 No alias Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO) 0.03 Orthogroups_2024-Update
Sopen04g007020 No alias Protein kinase domain 0.02 Orthogroups_2024-Update
Sopen10g034590 No alias Protein kinase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 47 86
No external refs found!