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  5. Solyc07g062210

Solyc07g062210


Description : Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)


Gene families : OG_42_0000861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g062210
Cluster HCCA clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
A4A49_02423 No alias protein trichome birefringence-like 41 0.05 Orthogroups_2024-Update
At2g30900 No alias Protein trichome birefringence-like 43... 0.04 Orthogroups_2024-Update
Bradi2g45320 No alias TRICHOME BIREFRINGENCE-LIKE 37 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 44 96
IPR026057 PC-Esterase 97 218
No external refs found!