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  5. Solyc07g062390

Solyc07g062390


Description : Tubby-like F-box protein (AHRD V3.3 *** K4CGS2_SOLLC)


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g062390
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
At1g25280 No alias Tubby-like F-box protein 10... 0.03 Orthogroups_2024-Update
At2g47900 No alias TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2] 0.03 Orthogroups_2024-Update
GRMZM2G163726 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.05 Orthogroups_2024-Update
LOC_Os03g22800 No alias OsFBT5 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_87289g0010 No alias (at2g47900 : 157.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
PSME_00056327-RA No alias (at1g53320 : 261.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
Potri.002G068200 No alias tubby like protein 5 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 123 379
IPR001810 F-box_dom 58 104
No external refs found!