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  5. LOC_Os04g21910

LOC_Os04g21910


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g21910
Cluster HCCA clusters: cluster_0022

Target Alias Description ECC score Gene Family Method Actions
At5g39680 No alias Pentatricopeptide repeat-containing protein At5g39680... 0.02 Orthogroups_2024-Update
Bradi1g03670 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g35640 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g14000 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Brara.G01460.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01279.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G076257 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G175253 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G018170.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G079090.7 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g45840 No alias CRR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g38610 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G175900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Seita.8G097200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.010G197400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen11g024580 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!