Description : retrotransposon protein, putative, unclassified, expressed
Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os04g23360 | |
Cluster | HCCA clusters: cluster_0133 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.I04085.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Glyma.01G135100 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.04G116000 | No alias | PIF1 helicase | 0.02 | Orthogroups_2024-Update | |
Glyma.05G078600 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
Glyma.09G061100 | No alias | PIF1 helicase | 0.02 | Orthogroups_2024-Update | |
Glyma.09G080200 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.12G111300 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.16G109000 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.20G059700 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g44200 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g23690 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os11g28650 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.008G167100 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Seita.1G149400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.2G161100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.4G159100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.9G083700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc07g032810 | No alias | LOW QUALITY:Helicase-like protein (AHRD V3.3 *-* Q9AYF0_ORYSJ) | 0.03 | Orthogroups_2024-Update | |
Sopen09g023800 | No alias | PIF1-like helicase | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEA | InterProScan predictions |
MF | GO:0003678 | DNA helicase activity | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Predicted GO |
BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predicted GO |
BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predicted GO |
BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predicted GO |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
BP | GO:0033044 | regulation of chromosome organization | IEP | Predicted GO |
BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predicted GO |
BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
BP | GO:0051783 | regulation of nuclear division | IEP | Predicted GO |
BP | GO:0051983 | regulation of chromosome segregation | IEP | Predicted GO |
BP | GO:0090231 | regulation of spindle checkpoint | IEP | Predicted GO |
BP | GO:0090266 | regulation of mitotic cell cycle spindle assembly checkpoint | IEP | Predicted GO |
BP | GO:1901976 | regulation of cell cycle checkpoint | IEP | Predicted GO |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Predicted GO |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predicted GO |
BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predicted GO |
BP | GO:1903504 | regulation of mitotic spindle checkpoint | IEP | Predicted GO |
BP | GO:1905818 | regulation of chromosome separation | IEP | Predicted GO |
No external refs found! |