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LOC_Os04g24530


Description : AMP-binding domain containing protein, expressed


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g24530
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
Bradi3g34531 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Bradi4g19947 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.4G191500.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Solyc03g097030 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update
Sopen03g001090 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 462 537
IPR000873 AMP-dep_Synth/Lig 43 453
No external refs found!