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  5. LOC_Os04g25880

LOC_Os04g25880


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0002114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g25880
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
25407 No alias EID1-like 1 0.03 Orthogroups_2024-Update
Brara.C00669.1 No alias substrate adaptor EDL of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
LOC_Os07g40710 No alias circadian clock coupling factor-related, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G378000.1 No alias substrate adaptor EDL of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!