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  5. LOC_Os04g28210

LOC_Os04g28210


Description : verticillium wilt disease resistance protein, putative, expressed


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g28210
Cluster HCCA clusters: cluster_0070

Target Alias Description ECC score Gene Family Method Actions
Brara.G00416.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04084.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01468.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G174128 No alias receptor like protein 7 0.02 Orthogroups_2024-Update
LOC_Os01g06760 No alias verticillium wilt disease resistance protein Ve2,... 0.03 Orthogroups_2024-Update
Potri.011G054500 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Potri.011G055200 No alias receptor like protein 53 0.02 Orthogroups_2024-Update
Potri.012G010500 No alias receptor like protein 43 0.02 Orthogroups_2024-Update
Potri.012G027200 No alias receptor like protein 27 0.04 Orthogroups_2024-Update
Potri.012G028600 No alias receptor like protein 27 0.02 Orthogroups_2024-Update
Potri.T114101 No alias receptor like protein 27 0.02 Orthogroups_2024-Update
Seita.6G164000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G059300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G075700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g009690 No alias BnaC05g27570D protein (AHRD V3.3 --* A0A078CAX2_BRANA) 0.02 Orthogroups_2024-Update
Solyc01g009930 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc01g098680 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.02 Orthogroups_2024-Update
Solyc12g006020 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g099980 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Sopen01g001730 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update
Sopen01g001740 No alias Leucine Rich Repeat 0.04 Orthogroups_2024-Update
Sopen01g001750 No alias Leucine Rich Repeat 0.04 Orthogroups_2024-Update
Sopen01g003910 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen01g003920 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen12g007030 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 253 313
IPR013210 LRR_N_plant-typ 50 92
IPR001611 Leu-rich_rpt 911 925
No external refs found!