LOC_Os04g28520


Description : male sterility protein, putative, expressed


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g28520
Cluster HCCA clusters: cluster_0053

Target Alias Description ECC score Gene Family Method Actions
270198 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
A4A49_16197 No alias fatty acyl-coa reductase 3 0.02 Orthogroups_2024-Update
A4A49_24360 No alias fatty acyl-coa reductase 3 0.02 Orthogroups_2024-Update
Bradi2g47121 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Bradi4g37862 No alias fatty acid reductase 1 0.02 Orthogroups_2024-Update
Bradi4g38460 No alias fatty acid reductase 4 0.04 Orthogroups_2024-Update
MA_11960g0010 No alias (at3g11980 : 566.0) Similar to fatty acid reductases.;... 0.03 Orthogroups_2024-Update
PSME_00008784-RA No alias (at3g44540 : 392.0) Encodes a member of the eight-member... 0.04 Orthogroups_2024-Update
PSME_00015275-RA No alias (at3g44540 : 421.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00015276-RA No alias (at3g44540 : 403.0) Encodes a member of the eight-member... 0.04 Orthogroups_2024-Update
PSME_00019002-RA No alias (at3g44540 : 395.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00030498-RA No alias (at3g44540 : 380.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
Potri.004G185000 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
Potri.009G144900 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
Potri.009G145000 No alias Jojoba acyl CoA reductase-related male sterility protein 0.04 Orthogroups_2024-Update
Sobic.007G170800.1 No alias fatty acyl CoA reductase *(FAR) 0.02 Orthogroups_2024-Update
Solyc09g005940 No alias Fatty acyl-CoA reductase (AHRD V3.3 *** K4CQ84_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g009570 No alias Fatty acyl-CoA reductase (AHRD V3.3 *-* K4CQY6_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033640 FAR_C 336 433
IPR013120 Male_sterile_NAD-bd 17 194
No external refs found!