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  5. LOC_Os04g29030

LOC_Os04g29030


Description : dehydrogenase, putative, expressed


Gene families : OG_42_0001126 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g29030
Cluster HCCA clusters: cluster_0088

Target Alias Description ECC score Gene Family Method Actions
Bradi5g07080 No alias Oxidoreductase, zinc-binding dehydrogenase family protein 0.02 Orthogroups_2024-Update
GRMZM2G126285 No alias Oxidoreductase, zinc-binding dehydrogenase family protein 0.03 Orthogroups_2024-Update
evm.model.contig_2089.2 No alias (at4g13010 : 108.0) Oxidoreductase, zinc-binding... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013154 ADH_N 67 129
No external refs found!