1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g29424

LOC_Os04g29424


Description : retrotransposon protein, putative, LINE subclass, expressed


Gene families : OG_42_0008087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008087_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g29424
Cluster HCCA clusters: cluster_0084


Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 382 481
IPR000477 RT_dom 26 239
No external refs found!