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  5. LOC_Os04g32050

LOC_Os04g32050


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g32050
Cluster HCCA clusters: cluster_0111

Target Alias Description ECC score Gene Family Method Actions
At3g17650 No alias Probable metal-nicotianamine transporter YSL5... 0.02 Orthogroups_2024-Update
At3g27020 No alias Probable metal-nicotianamine transporter YSL6... 0.03 Orthogroups_2024-Update
Bradi5g16160 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
GRMZM2G120922 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
HORVU2Hr1G090280.4 No alias iron chelator transporter *(YSL) 0.02 Orthogroups_2024-Update
MA_10429029g0010 No alias (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3);... 0.03 Orthogroups_2024-Update
MA_10433998g0010 No alias (at1g65730 : 685.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
MA_110581g0010 No alias (at5g53550 : 808.0) YELLOW STRIPE like 3 (YSL3);... 0.03 Orthogroups_2024-Update
MA_14566g0010 No alias (at5g41000 : 528.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00004865-RA No alias (at1g65730 : 848.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00027771-RA No alias (at1g65730 : 877.0) Arabidopsis thaliana... 0.01 Orthogroups_2024-Update
PSME_00044922-RA No alias (at1g65730 : 907.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Potri.012G024700 No alias YELLOW STRIPE like 3 0.02 Orthogroups_2024-Update
Seita.3G017800.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Seita.7G173200.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Sobic.004G224000.2 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Sobic.006G152600.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Solyc09g074960 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 40 659
No external refs found!