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  5. Solyc07g063450

Solyc07g063450


Description : Lysine-specific histone demethylase 1-like protein (AHRD V3.3 *** A0A0B0MWK3_GOSAR)


Gene families : OG_42_0001212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g063450
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
A4A49_34200 No alias protein flowering locus d 0.03 Orthogroups_2024-Update
GRMZM2G019863 No alias Flavin containing amine oxidoreductase family protein 0.03 Orthogroups_2024-Update
Kfl00249_0010 kfl00249_0010_v1.1 (at3g10390 : 622.0) Encodes a plant homolog of a SWIRM... 0.02 Orthogroups_2024-Update
Seita.1G325300.1 No alias histone demethylase *(KDM1a/b/c) 0.03 Orthogroups_2024-Update
Sobic.006G177200.1 No alias flowering time factor *(FLD) & histone demethylase *(KDM1a/b/c) 0.03 Orthogroups_2024-Update
Solyc07g063500 No alias Lysine-specific histone demethylase 1-like protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 170 594
IPR007526 SWIRM 68 144
No external refs found!