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  5. Solyc07g063500

Solyc07g063500


Description : Lysine-specific histone demethylase 1-like protein (AHRD V3.3 *** A0A0B0MWK3_GOSAR)


Gene families : OG_42_0001212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g063500
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G019863 No alias Flavin containing amine oxidoreductase family protein 0.03 Orthogroups_2024-Update
Potri.011G127600 No alias LSD1-like2 0.03 Orthogroups_2024-Update
Solyc05g055580 No alias MSCS-like 2 (AHRD V3.3 --* AT5G10490.3) 0.03 Orthogroups_2024-Update
Solyc07g063450 No alias Lysine-specific histone demethylase 1-like protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen07g031680 No alias Flavin containing amine oxidoreductase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 174 598
IPR007526 SWIRM 72 148
No external refs found!