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Description : Cytochrome c-type biogenesis ccda-like chloroplastic protein (AHRD V3.3 *** CCDA_ARATH)
Gene families : OG_42_0007501 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc07g063570 | |
| Cluster | HCCA clusters: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 270705 | No alias | cytochrome c biogenesis protein family | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G147300 | No alias | cytochrome c biogenesis protein family | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| BP | GO:0017004 | cytochrome complex assembly | IEA | InterProScan predictions |
| BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predicted GO |
| MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| MF | GO:0004325 | ferrochelatase activity | IEP | Predicted GO |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | Predicted GO |
| BP | GO:0006415 | translational termination | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0006783 | heme biosynthetic process | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
| MF | GO:0016149 | translation release factor activity, codon specific | IEP | Predicted GO |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Predicted GO |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Predicted GO |
| MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
| BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
| BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003834 | Cyt_c_assmbl_TM_dom | 155 | 362 |
| No external refs found! |