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  5. LOC_Os04g33840

LOC_Os04g33840


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0009595 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g33840
Cluster HCCA clusters: cluster_0084


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 341 364
IPR002885 Pentatricopeptide_repeat 235 263
IPR002885 Pentatricopeptide_repeat 203 231
IPR002885 Pentatricopeptide_repeat 266 292
IPR002885 Pentatricopeptide_repeat 172 201
IPR002885 Pentatricopeptide_repeat 440 464
IPR002885 Pentatricopeptide_repeat 365 412
No external refs found!