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  5. LOC_Os04g34580

LOC_Os04g34580


Description : FAD binding domain containing protein, expressed


Gene families : OG_42_0000503 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g34580
Cluster HCCA clusters: cluster_0032

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G891656 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.03 Orthogroups_2024-Update
MA_911455g0010 No alias (at4g38540 : 128.0) FAD/NAD(P)-binding oxidoreductase... 0.02 Orthogroups_2024-Update
PSME_00006475-RA No alias (at4g38540 : 265.0) FAD/NAD(P)-binding oxidoreductase... 0.02 Orthogroups_2024-Update
Potri.001G307500 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.03 Orthogroups_2024-Update
Sobic.001G500200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc12g013690 No alias FAD/NAD(P)-binding oxidoreductase family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen04g013330 No alias FAD binding domain 0.02 Orthogroups_2024-Update
Sopen12g007040 No alias Lycopene cyclase protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0090231 regulation of spindle checkpoint IEP Predicted GO
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP Predicted GO
BP GO:1901976 regulation of cell cycle checkpoint IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903504 regulation of mitotic spindle checkpoint IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
InterPro domains Description Start Stop
IPR002938 FAD-bd 16 206
No external refs found!