LOC_Os04g34970

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g34970
Cluster	HCCA clusters: cluster_0119

Target	Alias	Description	ECC score	Gene Family Method
68470	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
80895	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_23921	No alias	ethylene-responsive transcription factor erf034	0.02	Orthogroups_2024-Update
At1g15360	No alias	Ethylene-responsive transcription factor WIN1...	0.02	Orthogroups_2024-Update
At1g28160	No alias	Ethylene-responsive transcription factor ERF087...	0.02	Orthogroups_2024-Update
At1g36060	No alias	Ethylene-responsive transcription factor ERF055...	0.03	Orthogroups_2024-Update
At2g40220	No alias	Ethylene-responsive transcription factor ABI4...	0.03	Orthogroups_2024-Update
At5g67190	No alias	Ethylene-responsive transcription factor ERF010...	0.02	Orthogroups_2024-Update
Bradi1g04110	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A00880.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.A03156.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.B02236.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.D02714.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.F03308.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.G02253.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I05105.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G111415	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G119865	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
GRMZM2G380377	No alias	dehydration response element B1A	0.04	Orthogroups_2024-Update
GRMZM5G846057	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
GRMZM5G852704	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Glyma.07G044300	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Glyma.08G149200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G240100	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G077680.2	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G111550.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G088790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g34260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g38090	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g08490	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g11480	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g41060	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_100577g0010	No alias	(at5g21960 : 112.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_19854g0020	No alias	(at5g21960 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_329325g0010	No alias	(at4g17500 : 94.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_959784g0010	No alias	(at1g19210 : 119.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Mp7g13760.1	No alias	transcription factor (DREB)	0.02	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00046052-RA	No alias	(at1g19210 : 89.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G069300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.001G110800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.02	Orthogroups_2024-Update
Potri.003G121200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.012G032900	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Potri.012G134100	No alias	C-repeat-binding factor 4	0.02	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G013700	No alias	erf domain protein 9	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Potri.T050600	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s19_272V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s259_94V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_3V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s276_72V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.04	Orthogroups_2024-Update
Pp1s41_212V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s79_25V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G027200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.1G174700.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.1G259200.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.1G330800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Seita.5G348100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.7G098100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.8G046300.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.8G237900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.9G320700.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.02	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.02	Orthogroups_2024-Update
Solyc04g078640	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Solyc05g013540	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update
Solyc10g076370	No alias	Dehydration-responsive element binding protein (AHRD...	0.02	Orthogroups_2024-Update
Solyc11g042560	No alias	Ethylene-responsive transcription factor ERF021 family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	62	111

External Links

No external refs found!

LOC_Os04g34970

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation