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  5. LOC_Os04g35090

LOC_Os04g35090


Description : 40S ribosomal protein S10, putative, expressed


Gene families : OG_42_0001576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g35090
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
37555 No alias RNA binding Plectin/S10 domain-containing protein 0.04 Orthogroups_2024-Update
A4A49_36949 No alias 40s ribosomal protein s10-3 0.07 Orthogroups_2024-Update
A4A49_64300 No alias 40s ribosomal protein s10-3 0.09 Orthogroups_2024-Update
At5g52650 No alias 40S ribosomal protein S10-3... 0.03 Orthogroups_2024-Update
Bradi2g61560 No alias RNA binding Plectin/S10 domain-containing protein 0.05 Orthogroups_2024-Update
Bradi3g43060 No alias RNA binding Plectin/S10 domain-containing protein 0.07 Orthogroups_2024-Update
Brara.A01568.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.C01425.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Brara.D01152.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.K00178.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre09.g411100 No alias RNA binding Plectin/S10 domain-containing protein 0.04 Orthogroups_2024-Update
GRMZM2G171484 No alias RNA binding Plectin/S10 domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.01G222100 No alias RNA binding Plectin/S10 domain-containing protein 0.06 Orthogroups_2024-Update
Glyma.05G211100 No alias RNA binding Plectin/S10 domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.08G017500 No alias RNA binding Plectin/S10 domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.11G021700 No alias RNA binding Plectin/S10 domain-containing protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G111760.2 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
MA_111018g0010 No alias (q9ayp4|rs10_orysa : 184.0) 40S ribosomal protein S10 -... 0.03 Orthogroups_2024-Update
MA_314020g0010 No alias (q9ayp4|rs10_orysa : 182.0) 40S ribosomal protein S10 -... 0.05 Orthogroups_2024-Update
PSME_00025508-RA No alias (q9ayp4|rs10_orysa : 181.0) 40S ribosomal protein S10 -... 0.03 Orthogroups_2024-Update
Potri.004G073500 No alias RNA binding Plectin/S10 domain-containing protein 0.05 Orthogroups_2024-Update
Potri.013G027900 No alias RNA binding Plectin/S10 domain-containing protein 0.04 Orthogroups_2024-Update
Pp1s255_28V6 No alias 40s ribosomal protein s10 0.03 Orthogroups_2024-Update
Pp1s281_7V6 No alias 40s ribosomal protein s10 0.07 Orthogroups_2024-Update
Pp1s427_37V6 No alias 40s ribosomal protein s10 0.07 Orthogroups_2024-Update
Pp1s43_46V6 No alias 40s ribosomal protein s10 0.08 Orthogroups_2024-Update
Seita.5G462400.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Seita.7G099000.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G436700.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.006G081100.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Solyc01g099670 No alias meloidogyne-induced giant cell protein db212 0.06 Orthogroups_2024-Update
Sopen01g043180 No alias Plectin/S10 domain 0.08 Orthogroups_2024-Update
Sopen12g032370 No alias Plectin/S10 domain 0.05 Orthogroups_2024-Update
evm.model.contig_636.5 No alias (q9ayp4|rs10_orysa : 95.9) 40S ribosomal protein S10 -... 0.09 Orthogroups_2024-Update
evm.model.tig00001164.5 No alias (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!