LOC_Os04g38570

Description : multidrug resistance protein, putative, expressed

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g38570
Cluster	HCCA clusters: cluster_0089

Target	Alias	Description	ECC score	Gene Family Method
419451	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
92485	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
At3g28390	No alias	ABC transporter B family member 18...	0.03	Orthogroups_2024-Update
Bradi2g47337	No alias	ATP binding cassette subfamily B4	0.05	Orthogroups_2024-Update
Bradi2g47410	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Bradi2g48610	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Brara.G00386.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
GRMZM2G085111	No alias	P-glycoprotein 21	0.02	Orthogroups_2024-Update
GRMZM2G119894	No alias	P-glycoprotein 21	0.04	Orthogroups_2024-Update
GRMZM5G833207	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
Glyma.03G183600	No alias	ATP binding cassette subfamily B1	0.02	Orthogroups_2024-Update
Glyma.08G342600	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Glyma.10G055000	No alias	ATP binding cassette subfamily B1	0.03	Orthogroups_2024-Update
Glyma.13G118500	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
Glyma.13G119000	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
Glyma.14G220200	No alias	P-glycoprotein 13	0.03	Orthogroups_2024-Update
HORVU3Hr1G065240.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
HORVU3Hr1G068650.8	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
LOC_Os01g18670	No alias	MDR-like ABC transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g34970	No alias	MDR-like ABC transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g40570	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00005534-RA	No alias	(at3g62150 : 1137.0) P-glycoprotein 21 (PGP21);...	0.03	Orthogroups_2024-Update
PSME_00024064-RA	No alias	(at3g28345 : 1431.0) ABC transporter family protein;...	0.01	Orthogroups_2024-Update
PSME_00035545-RA	No alias	(q6yuu5\|mdr_orysa : 1259.0) Putative multidrug...	0.02	Orthogroups_2024-Update
Potri.010G003000	No alias	ATP binding cassette subfamily B4	0.04	Orthogroups_2024-Update
Potri.018G141400	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Seita.5G283700.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.003G180400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Solyc04g010310	No alias	ABC transporter B family protein (AHRD V3.3 *** A0A072VSU0_MEDTR)	0.02	Orthogroups_2024-Update
Sopen03g040850	No alias	ABC transporter transmembrane region	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
MF	GO:0008198	ferrous iron binding	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predicted GO
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	390	537
IPR003439	ABC_transporter-like	1036	1184
IPR011527	ABC1_TM_dom	695	966
IPR011527	ABC1_TM_dom	53	319

External Links

No external refs found!

LOC_Os04g38570

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation